Peer-Reviewed Journal Articles

2025

33.
S.J. Weintraub, Z. Li, C.L. Nakagawa, J.H. Collins, E.M. Young
Biotechnology and Bioengineering (2025) · doi

2024

32.
A. Adler, J.S. Bader, B. Basnight, B.W. Booth, J. Cai, E. Cho, J.H. Collins, Y. Ge, J. Grothendieck, K. Keating, T. Marshall, A. Persikov, H. Scott, R. Siegelmann, M. Singh, A. Taggart, B. Toll, K.H. Wan, D. Wyschogrod, F. Yaman, E.M. Young, S.E. Celniker, N. Roehner
ACS Synthetic Biology (2024) · doi
31.
B. Yang, B. Vaisvil, D. Schmitt, J. Collins, E.M. Young, V. Kapatral, R. Rao
Infection and Immunity (2024) · doi · preprint
30.
E.E. Tobin*, J.H. Collins*, C.B. Marsan, G.T. Nadeau, K. Mori, A. Lipzen, S. Mondo, I.V. Grigoriev, E.M. Young
*= equal contribution
Applied Microbiology and Biotechnology (2024) · doi · preprint

2023

29.
E.M. van Zyl, M.A. Kennedy, W. Nason, S.J. Fenlon, E.M. Young, L.J. Smith, S.R. Bhatia, J.M. Coburn
Biomaterials Advances (2023) · doi
28.
K.W. Keating, E.M. Young
ACS Synthetic Biology (2023) · doi · preprint
27.
J.H. Collins, L. Kunyeit, S. Weintraub, N. Sharma, C. White, N. Haq, K.A. Anu-Appaiah, R.P. Rao, E.M. Young
G3: Genes, Genomes, Genetics (2023) · doi
26.
J.H. Collins, E.M. Young
Microbiology Resource Announcements (2023) · doi
25.
C. Brzycki Newton, E.M. Young, S.C. Roberts
Frontiers in Bioengineering and Biotechnology (2023) · doi
24.
J.H. Collins, A. Cosio, G. Brogan, L. Chico, A. Rozen, E. Thomson, E.M. Young
Microbiology Resource Announcements (2023) · doi
23.
B. Peng, S.J. Weintraub, Z. Lu, S. Evans, Q. Shen, L. McDonnell, M. Plan, T. Collier, L.C. Cheah, L. Ji, C.B. Howard, W. Anderson, M. Trau, G. Dumsday, E.L. Bredeweg, E.M. Young, R. Speight, C.E. Vickers
ACS Synthetic Biology (2023) · doi

2022

22.
B.T. McInnes, J.S. Downie, Y. Hao, J. Jett, K. Keating, G. Nakum, S. Ranjan, N.E. Rodriguez, J. Tang, D. Xiang, E.M. Young, M.H. Nguyen
ACS Synthetic Biology (2022) · doi
21.
J. Beal, C.A. Telmer, A. Vignoni, Y. Boada, G.S. Baldwin, L. Hallett, T. Lee, V. Selvarajah, S. Billerbeck, B. Brown, G. Cai, L. Cai, E. Eisenstein, D. Kiga, D. Ross, N. Alperovich, N. Sprent, J. Thompson, E.M. Young, D. Endy, T. Haddock-Angelli
Synthetic Biology (2022) · doi

2021

20.
J.H. Collins, K.W. Keating, T.R. Jones, S. Balaji, C.B. Marsan, M. Çomo, Z.J. Newlon, T. Mitchell, B. Bartley, A. Adler, N. Roehner, E.M. Young
Nature Communications (2021) · doi · preprint
19.
J. Mante, Y. Hao, J. Jett, U. Joshi, K. Keating, X. Lu, G. Nakum, N.E. Rodriguez, J. Tang, L. Terry, X. Wu, E. Yu, J.S. Downie, B.T. McInnes, M.H. Nguyen, B. Sepulvado, E.M. Young, C.J. Myers
ACS Synthetic Biology (2021) · doi
18.
J. Mante, N. Roehner, K. Keating, J.A. McLaughlin, E.M. Young, J. Beal, C.J. Myers
ACS Synthetic Biology (2021) · doi

2020

17.
Y. Chen, S. Zhang, E.M. Young, T.S. Jones, D. Densmore, C.A. Voigt
Nature Microbiology (2020) · doi

2018

16.
A. Casini*, F.-Y. Chang*, R. Eleure*, A. King*, E.M. Young*, Q.M. Dudley, A. Karim, K. Pratt, C. Bristol, A. Forget, A. Ghodasara, R. Warden-Rothman, R. Gan, A. Cristofaro, A.E. Borujeni, M.-H. Ryu, J. Li, Y.-C. Kwon, H. Wang, E. Tatsis, C. Rodriguez-Lopez, S. O’Connor, M.H. Mdema, M.A. Fischbach, M.C. Jewett, C.A. Voigt, and D.B. Gordon
* = Equal contribution
Journal of the American Chemical Society (2018) · doi
15.
E.M. Young, Z. Zhao, B.E.M. Gielesen, L. Wu, D.B. Gordon, J.A. Roubos, C.A. Voigt
Metabolic Engineering (2018) · doi

2017

14.
S. Buren, E.M. Young, E. Sweeny, C.A. Voigt, and L. Rubio
ACS Synthetic Biology (2017) · doi

2016

13.
DoubleDutch: a tool for designing combinatorial libraries of metabolic pathway variants
N. Roehner, E.M. Young, C.A. Voigt, D.B. Gordon, and D. Densmore
​ACS Synthetic Biology (2016)

2014

12.
E.M. Young, A. Tong, H. Bui, C. Spofford, and H.S. Alper
Proceedings of the National Academies of Science of the United States of America (2014) · doi

2012

11.
E.M. Young, A.D. Comer, H. Huang, and H.S. Alper
Metabolic Engineering (2012) · doi

2011

10.
E.M. Young, A. Poucher, A.D. Comer, A. Bailey, and H.S. Alper
Applied and Environmental Microbiology (2011) · doi

Preprints

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2025

2023

8.
K.W. Keating, E.M. van Zyl, J.H. Collins, C. Nakagawa, S.J. Weintraub, J.M. Coburn, E.M. Young
bioRxiv (2023) · doi

Reviews

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7.
K.A. Haynes*, L.B. Andrews, C.L. Beisel, J. Chappell, C.E. Cuba Samaniego, J.E. Dueber, M.J. Dunlop, E. Franco, J.B. Lucks, V. Noireaux, D.F. Savage, P.A. Silver, M. Smanski, E.M. Young
*= corresponding
ACS Synthetic Biology (2024) · doi
6.
K.W. Keating, E.M. Young
Current Opinion in Chemical Engineering (2019) · doi
5.
J.H. Collins, E.M. Young
Current Opinion in Biotechnology (2018) · doi
4.
E.M. Young, S.-M. Lee, and H.S. Alper
​Biotechnology for Biofuels (2010) · doi
3.
E.M. Young and H.S. Alper
Journal of Biomedicine and Biotechnology (2010) · doi

Book Chapters

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2.
C.M. Brzycki, E.M. Young, S.C. Roberts
Exploring Plant Cells for the Production of Compounds of Interest (Springer) (2021) · doi
1.
S.-M. Lee, E.M. Young, and H.S. Alper
Direct Microbial Conversion of Biomass to Advanced Biofuels (2015)

Patents

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2.
H.S. Alper, S.-M. Lee, E.M. Young
(2015)
1.